tesseract/classify/clusttool.cpp
Jim O'Regan 524a61452d Doxygen
Squashed commit from https://github.com/tesseract-ocr/tesseract/tree/more-doxygen
closes #14

Commits:
6317305  doxygen
9f42f69  doxygen
0fc4d52  doxygen
37b4b55  fix typo
bded8f1  some more doxy
020eb00  slight tweak
524666d  doxygenify
2a36a3e  doxygenify
229d218  doxygenify
7fd28ae  doxygenify
a8c64bc  doxygenify
f5d21b6  fix
5d8ede8  doxygenify
a58a4e0  language_model.cpp
fa85709  lm_pain_points.cpp lm_state.cpp
6418da3  merge
06190ba  Merge branch 'old_doxygen_merge' into more-doxygen
84acf08  Merge branch 'master' into more-doxygen
50fe1ff  pagewalk.cpp cube_reco_context.cpp
2982583  change to relative
192a24a  applybox.cpp, take one
8eeb053  delete docs for obsolete params
52e4c77  modernise classify/ocrfeatures.cpp
2a1cba6  modernise cutil/emalloc.cpp
773e006  silence doxygen warning
aeb1731  silence doxygen warning
f18387f  silence doxygen; new params are unused?
15ad6bd  doxygenify cutil/efio.cpp
c8b5dad  doxygenify cutil/danerror.cpp
784450f  the globals and exceptions parts are obsolete; remove
8bca324  doxygen classify/normfeat.cpp
9bcbe16  doxygen classify/normmatch.cpp
aa9a971  doxygen ccmain/cube_control.cpp
c083ff2  doxygen ccmain/cube_reco_context.cpp
f842850  params changed
5c94f12  doxygen ccmain/cubeclassifier.cpp
15ba750  case sensitive
f5c71d4  case sensitive
f85655b  doxygen classify/intproto.cpp
4bbc7aa  partial doxygen classify/mfx.cpp
dbb6041  partial doxygen classify/intproto.cpp
2aa72db  finish doxygen classify/intproto.cpp
0b8de99  doxygen training/mftraining.cpp
0b5b35c  partial doxygen ccstruct/coutln.cpp
b81c766  partial doxygen ccstruct/coutln.cpp
40fc415  finished? doxygen ccstruct/coutln.cpp
6e4165c  doxygen classify/clusttool.cpp
0267dec  doxygen classify/cutoffs.cpp
7f0c70c  doxygen classify/fpoint.cpp
512f3bd  ignore ~ files
5668a52  doxygen classify/intmatcher.cpp
84788d4  doxygen classify/kdtree.cpp
29f36ca  doxygen classify/mfoutline.cpp
40b94b1  silence doxygen warnings
6c511b9  doxygen classify/mfx.cpp
f9b4080  doxygen classify/outfeat.cpp
aa1df05  doxygen classify/picofeat.cpp
cc5f466  doxygen training/cntraining.cpp
cce044f  doxygen training/commontraining.cpp
167e216  missing param
9498383  renamed params
37eeac2  renamed param
d87b5dd  case
c8ee174  renamed params
b858db8  typo
4c2a838  h2 context?
81a2c0c  fix some param names; add some missing params, no docs
bcf8a4c  add some missing params, no docs
af77f86  add some missing params, no docs; fix some param names
01df24e  fix some params
6161056  fix some params
68508b6  fix some params
285aeb6  doxygen complains here no matter what
529bcfa  rm some missing params, typos
cd21226  rm some missing params, add some new ones
48a4bc2  fix params
c844628  missing param
312ce37  missing param; rename one
ec2fdec  missing param
05e15e0  missing params
d515858  change "<" to &lt; to make doxygen happy
b476a28  wrong place
2015-07-20 18:48:00 +01:00

467 lines
15 KiB
C++

/******************************************************************************
** Filename: clustertool.c
** Purpose: Misc. tools for use with the clustering routines
** Author: Dan Johnson
** History: 6/6/89, DSJ, Created.
**
** (c) Copyright Hewlett-Packard Company, 1988.
** Licensed under the Apache License, Version 2.0 (the "License");
** you may not use this file except in compliance with the License.
** You may obtain a copy of the License at
** http://www.apache.org/licenses/LICENSE-2.0
** Unless required by applicable law or agreed to in writing, software
** distributed under the License is distributed on an "AS IS" BASIS,
** WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
** See the License for the specific language governing permissions and
** limitations under the License.
******************************************************************************/
//--------------------------Include Files----------------------------------
#include "clusttool.h"
#include "const.h"
#include "danerror.h"
#include "emalloc.h"
#include "scanutils.h"
#include <stdio.h>
#include <math.h>
//---------------Global Data Definitions and Declarations--------------------
#define TOKENSIZE 80 //< max size of tokens read from an input file
#define MAXSAMPLESIZE 65535 //< max num of dimensions in feature space
//#define MAXBLOCKSIZE 65535 //< max num of samples in a character (block size)
/**
* This routine reads a single integer from the specified
* file and checks to ensure that it is between 0 and
* MAXSAMPLESIZE.
* @param File open text file to read sample size from
* @return Sample size
* @note Globals: None
* @note Exceptions: ILLEGALSAMPLESIZE illegal format or range
* @note History: 6/6/89, DSJ, Created.
*/
uinT16 ReadSampleSize(FILE *File) {
int SampleSize;
if ((tfscanf(File, "%d", &SampleSize) != 1) ||
(SampleSize < 0) || (SampleSize > MAXSAMPLESIZE))
DoError (ILLEGALSAMPLESIZE, "Illegal sample size");
return (SampleSize);
}
/**
* This routine reads textual descriptions of sets of parameters
* which describe the characteristics of feature dimensions.
*
* Exceptions:
* - ILLEGALCIRCULARSPEC
* - ILLEGALESSENTIALSPEC
* - ILLEGALMINMAXSPEC
* @param File open text file to read N parameter descriptions from
* @param N number of parameter descriptions to read
* @return Pointer to an array of parameter descriptors.
* @note Globals: None
* @note History: 6/6/89, DSJ, Created.
*/
PARAM_DESC *ReadParamDesc(FILE *File, uinT16 N) {
int i;
PARAM_DESC *ParamDesc;
char Token[TOKENSIZE];
ParamDesc = (PARAM_DESC *) Emalloc (N * sizeof (PARAM_DESC));
for (i = 0; i < N; i++) {
if (tfscanf(File, "%s", Token) != 1)
DoError (ILLEGALCIRCULARSPEC,
"Illegal circular/linear specification");
if (Token[0] == 'c')
ParamDesc[i].Circular = TRUE;
else
ParamDesc[i].Circular = FALSE;
if (tfscanf(File, "%s", Token) != 1)
DoError (ILLEGALESSENTIALSPEC,
"Illegal essential/non-essential spec");
if (Token[0] == 'e')
ParamDesc[i].NonEssential = FALSE;
else
ParamDesc[i].NonEssential = TRUE;
if (tfscanf(File, "%f%f", &(ParamDesc[i].Min), &(ParamDesc[i].Max)) != 2)
DoError (ILLEGALMINMAXSPEC, "Illegal min or max specification");
ParamDesc[i].Range = ParamDesc[i].Max - ParamDesc[i].Min;
ParamDesc[i].HalfRange = ParamDesc[i].Range / 2;
ParamDesc[i].MidRange = (ParamDesc[i].Max + ParamDesc[i].Min) / 2;
}
return (ParamDesc);
}
/**
* This routine reads a textual description of a prototype from
* the specified file.
*
* Exceptions:
* - ILLEGALSIGNIFICANCESPEC
* - ILLEGALSAMPLECOUNT
* - ILLEGALMEANSPEC
* - ILLEGALVARIANCESPEC
* - ILLEGALDISTRIBUTION
* @param File open text file to read prototype from
* @param N number of dimensions used in prototype
* @return List of prototypes
* @note Globals: None
* @note History: 6/6/89, DSJ, Created.
*/
PROTOTYPE *ReadPrototype(FILE *File, uinT16 N) {
char Token[TOKENSIZE];
int Status;
PROTOTYPE *Proto;
int SampleCount;
int i;
if ((Status = tfscanf(File, "%s", Token)) == 1) {
Proto = (PROTOTYPE *) Emalloc (sizeof (PROTOTYPE));
Proto->Cluster = NULL;
if (Token[0] == 's')
Proto->Significant = TRUE;
else
Proto->Significant = FALSE;
Proto->Style = ReadProtoStyle (File);
if ((tfscanf(File, "%d", &SampleCount) != 1) || (SampleCount < 0))
DoError (ILLEGALSAMPLECOUNT, "Illegal sample count");
Proto->NumSamples = SampleCount;
Proto->Mean = ReadNFloats (File, N, NULL);
if (Proto->Mean == NULL)
DoError (ILLEGALMEANSPEC, "Illegal prototype mean");
switch (Proto->Style) {
case spherical:
if (ReadNFloats (File, 1, &(Proto->Variance.Spherical)) == NULL)
DoError (ILLEGALVARIANCESPEC, "Illegal prototype variance");
Proto->Magnitude.Spherical =
1.0 / sqrt ((double) (2.0 * PI * Proto->Variance.Spherical));
Proto->TotalMagnitude =
pow (Proto->Magnitude.Spherical, (float) N);
Proto->LogMagnitude = log ((double) Proto->TotalMagnitude);
Proto->Weight.Spherical = 1.0 / Proto->Variance.Spherical;
Proto->Distrib = NULL;
break;
case elliptical:
Proto->Variance.Elliptical = ReadNFloats (File, N, NULL);
if (Proto->Variance.Elliptical == NULL)
DoError (ILLEGALVARIANCESPEC, "Illegal prototype variance");
Proto->Magnitude.Elliptical =
(FLOAT32 *) Emalloc (N * sizeof (FLOAT32));
Proto->Weight.Elliptical =
(FLOAT32 *) Emalloc (N * sizeof (FLOAT32));
Proto->TotalMagnitude = 1.0;
for (i = 0; i < N; i++) {
Proto->Magnitude.Elliptical[i] =
1.0 /
sqrt ((double) (2.0 * PI * Proto->Variance.Elliptical[i]));
Proto->Weight.Elliptical[i] =
1.0 / Proto->Variance.Elliptical[i];
Proto->TotalMagnitude *= Proto->Magnitude.Elliptical[i];
}
Proto->LogMagnitude = log ((double) Proto->TotalMagnitude);
Proto->Distrib = NULL;
break;
case mixed:
Proto->Distrib =
(DISTRIBUTION *) Emalloc (N * sizeof (DISTRIBUTION));
for (i = 0; i < N; i++) {
if (tfscanf(File, "%s", Token) != 1)
DoError (ILLEGALDISTRIBUTION,
"Illegal prototype distribution");
switch (Token[0]) {
case 'n':
Proto->Distrib[i] = normal;
break;
case 'u':
Proto->Distrib[i] = uniform;
break;
case 'r':
Proto->Distrib[i] = D_random;
break;
default:
DoError (ILLEGALDISTRIBUTION,
"Illegal prototype distribution");
}
}
Proto->Variance.Elliptical = ReadNFloats (File, N, NULL);
if (Proto->Variance.Elliptical == NULL)
DoError (ILLEGALVARIANCESPEC, "Illegal prototype variance");
Proto->Magnitude.Elliptical =
(FLOAT32 *) Emalloc (N * sizeof (FLOAT32));
Proto->Weight.Elliptical =
(FLOAT32 *) Emalloc (N * sizeof (FLOAT32));
Proto->TotalMagnitude = 1.0;
for (i = 0; i < N; i++) {
switch (Proto->Distrib[i]) {
case normal:
Proto->Magnitude.Elliptical[i] = 1.0 /
sqrt ((double)
(2.0 * PI * Proto->Variance.Elliptical[i]));
Proto->Weight.Elliptical[i] =
1.0 / Proto->Variance.Elliptical[i];
break;
case uniform:
case D_random:
Proto->Magnitude.Elliptical[i] = 1.0 /
(2.0 * Proto->Variance.Elliptical[i]);
break;
case DISTRIBUTION_COUNT:
ASSERT_HOST(!"Distribution count not allowed!");
}
Proto->TotalMagnitude *= Proto->Magnitude.Elliptical[i];
}
Proto->LogMagnitude = log ((double) Proto->TotalMagnitude);
break;
}
return (Proto);
}
else if (Status == EOF)
return (NULL);
else {
DoError (ILLEGALSIGNIFICANCESPEC, "Illegal significance specification");
return (NULL);
}
}
/**
* This routine reads an single token from the specified
* text file and interprets it as a prototype specification.
* @param File open text file to read prototype style from
* @return Prototype style read from text file
* @note Globals: None
* @note Exceptions: ILLEGALSTYLESPEC illegal prototype style specification
* @note History: 6/8/89, DSJ, Created.
*/
PROTOSTYLE ReadProtoStyle(FILE *File) {
char Token[TOKENSIZE];
PROTOSTYLE Style;
if (tfscanf(File, "%s", Token) != 1)
DoError (ILLEGALSTYLESPEC, "Illegal prototype style specification");
switch (Token[0]) {
case 's':
Style = spherical;
break;
case 'e':
Style = elliptical;
break;
case 'm':
Style = mixed;
break;
case 'a':
Style = automatic;
break;
default:
Style = elliptical;
DoError (ILLEGALSTYLESPEC, "Illegal prototype style specification");
}
return (Style);
}
/**
* This routine reads N floats from the specified text file
* and places them into Buffer. If Buffer is NULL, a buffer
* is created and passed back to the caller. If EOF is
* encountered before any floats can be read, NULL is
* returned.
* @param File open text file to read floats from
* @param N number of floats to read
* @param Buffer pointer to buffer to place floats into
* @return Pointer to buffer holding floats or NULL if EOF
* @note Globals: None
* @note Exceptions: ILLEGALFLOAT
* @note History: 6/6/89, DSJ, Created.
*/
FLOAT32* ReadNFloats(FILE * File, uinT16 N, FLOAT32 Buffer[]) {
int i;
int NumFloatsRead;
if (Buffer == NULL)
Buffer = reinterpret_cast<FLOAT32*>(Emalloc(N * sizeof(FLOAT32)));
for (i = 0; i < N; i++) {
NumFloatsRead = tfscanf(File, "%f", &(Buffer[i]));
if (NumFloatsRead != 1) {
if ((NumFloatsRead == EOF) && (i == 0)) {
Efree(Buffer);
return NULL;
} else {
DoError(ILLEGALFLOAT, "Illegal float specification");
}
}
}
return Buffer;
}
/**
* This routine writes an array of dimension descriptors to
* the specified text file.
* @param File open text file to write param descriptors to
* @param N number of param descriptors to write
* @param ParamDesc array of param descriptors to write
* @return None
* @note Globals: None
* @note Exceptions: None
* @note History: 6/6/89, DSJ, Created.
*/
void
WriteParamDesc (FILE * File, uinT16 N, PARAM_DESC ParamDesc[]) {
int i;
for (i = 0; i < N; i++) {
if (ParamDesc[i].Circular)
fprintf (File, "circular ");
else
fprintf (File, "linear ");
if (ParamDesc[i].NonEssential)
fprintf (File, "non-essential ");
else
fprintf (File, "essential ");
fprintf (File, "%10.6f %10.6f\n", ParamDesc[i].Min, ParamDesc[i].Max);
}
}
/**
* This routine writes a textual description of a prototype
* to the specified text file.
* @param File open text file to write prototype to
* @param N number of dimensions in feature space
* @param Proto prototype to write out
* @return None
* @note Globals: None
* @note Exceptions: None
* @note History: 6/12/89, DSJ, Created.
*/
void WritePrototype(FILE *File, uinT16 N, PROTOTYPE *Proto) {
int i;
if (Proto->Significant)
fprintf (File, "significant ");
else
fprintf (File, "insignificant ");
WriteProtoStyle (File, (PROTOSTYLE) Proto->Style);
fprintf (File, "%6d\n\t", Proto->NumSamples);
WriteNFloats (File, N, Proto->Mean);
fprintf (File, "\t");
switch (Proto->Style) {
case spherical:
WriteNFloats (File, 1, &(Proto->Variance.Spherical));
break;
case elliptical:
WriteNFloats (File, N, Proto->Variance.Elliptical);
break;
case mixed:
for (i = 0; i < N; i++)
switch (Proto->Distrib[i]) {
case normal:
fprintf (File, " %9s", "normal");
break;
case uniform:
fprintf (File, " %9s", "uniform");
break;
case D_random:
fprintf (File, " %9s", "random");
break;
case DISTRIBUTION_COUNT:
ASSERT_HOST(!"Distribution count not allowed!");
}
fprintf (File, "\n\t");
WriteNFloats (File, N, Proto->Variance.Elliptical);
}
}
/**
* This routine writes a text representation of N floats from
* an array to a file. All of the floats are placed on one line.
* @param File open text file to write N floats to
* @param N number of floats to write
* @param Array array of floats to write
* @return None
* @note Globals: None
* @note Exceptions: None
* @note History: 6/6/89, DSJ, Created.
*/
void WriteNFloats(FILE * File, uinT16 N, FLOAT32 Array[]) {
for (int i = 0; i < N; i++)
fprintf(File, " %9.6f", Array[i]);
fprintf(File, "\n");
}
/**
* This routine writes to the specified text file a word
* which represents the ProtoStyle. It does not append
* a carriage return to the end.
* @param File open text file to write prototype style to
* @param ProtoStyle prototype style to write
* @return None
* @note Globals: None
* @note Exceptions: None
* @note History: 6/8/89, DSJ, Created.
*/
void WriteProtoStyle(FILE *File, PROTOSTYLE ProtoStyle) {
switch (ProtoStyle) {
case spherical:
fprintf (File, "spherical");
break;
case elliptical:
fprintf (File, "elliptical");
break;
case mixed:
fprintf (File, "mixed");
break;
case automatic:
fprintf (File, "automatic");
break;
}
}
/**
* This routine writes a textual description of each prototype
* in the prototype list to the specified file. It also
* writes a file header which includes the number of dimensions
* in feature space and the descriptions for each dimension.
* @param File open text file to write prototypes to
* @param N number of dimensions in feature space
* @param ParamDesc descriptions for each dimension
* @param ProtoList list of prototypes to be written
* @param WriteSigProtos TRUE to write out significant prototypes
* @param WriteInsigProtos TRUE to write out insignificants
* @note Globals: None
* @return None
* @note Exceptions: None
* @note History: 6/12/89, DSJ, Created.
*/
void WriteProtoList(
FILE *File,
uinT16 N,
PARAM_DESC ParamDesc[],
LIST ProtoList,
BOOL8 WriteSigProtos,
BOOL8 WriteInsigProtos)
{
PROTOTYPE *Proto;
/* write file header */
fprintf(File,"%0d\n",N);
WriteParamDesc(File,N,ParamDesc);
/* write prototypes */
iterate(ProtoList)
{
Proto = (PROTOTYPE *) first_node ( ProtoList );
if (( Proto->Significant && WriteSigProtos ) ||
( ! Proto->Significant && WriteInsigProtos ) )
WritePrototype( File, N, Proto );
}
}