2024-07-21 02:20:18 +08:00
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vcpkg_from_github(
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OUT_SOURCE_PATH SOURCE_PATH
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REPO samtools/htslib
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REF "${VERSION}"
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2024-10-19 07:52:42 +08:00
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SHA512 6df1a493ac9f13cae5a510537bdf83aa9635a79efe635b8a5a5cbd89345c75c9a42e686c4f0497761ddfad3b86a9814ed35ba2ac340d0f1c7b5e2e186b152875
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2024-07-21 02:20:18 +08:00
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HEAD_REF develop
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PATCHES
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0001-set-linkage.patch
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0002-pthread-flag.patch
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0003-no-tests.patch
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0004-fix-find-htscodecs.patch
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2024-10-19 07:52:42 +08:00
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0005-remove-duplicate-lhts.patch # https://github.com/samtools/htslib/pull/1852
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2024-07-21 02:20:18 +08:00
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)
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set(FEATURE_OPTIONS "")
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macro(enable_feature feature switch)
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if("${feature}" IN_LIST FEATURES)
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list(APPEND FEATURE_OPTIONS "--enable-${switch}")
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else()
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list(APPEND FEATURE_OPTIONS "--disable-${switch}")
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endif()
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endmacro()
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enable_feature("bzip2" "bz2")
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enable_feature("lzma" "lzma")
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if("deflate" IN_LIST FEATURES)
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list(APPEND FEATURE_OPTIONS "--with-libdeflate")
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else()
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list(APPEND FEATURE_OPTIONS "--without-libdeflate")
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endif()
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vcpkg_configure_make(
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AUTOCONFIG
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SOURCE_PATH "${SOURCE_PATH}"
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OPTIONS
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--with-external-htscodecs
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--disable-libcurl
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--disable-gcs
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--disable-s3
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--disable-plugins
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${FEATURE_OPTIONS}
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)
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vcpkg_install_make(
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INSTALL_TARGET install-${VCPKG_LIBRARY_LINKAGE}
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)
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file(REMOVE_RECURSE "${CURRENT_PACKAGES_DIR}/debug/share")
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vcpkg_fixup_pkgconfig()
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vcpkg_install_copyright(FILE_LIST "${SOURCE_PATH}/LICENSE")
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