diff --git a/src/tools/msvc/pgflex.pl b/src/tools/msvc/pgflex.pl
index aceed5ffd..f6ed215e8 100644
--- a/src/tools/msvc/pgflex.pl	
+++ b/src/tools/msvc/pgflex.pl
@@ -12,7 +12,7 @@ $ENV{CYGWIN} = 'nodosfilewarning';
 
 do './src/tools/msvc/buildenv.pl' if -e 'src/tools/msvc/buildenv.pl';
 
-my ($flexver) = `flex -V`;    # grab first line
+my ($flexver) = `win_flex -V`;    # grab first line
 $flexver = (split(/\s+/, $flexver))[1];
 $flexver =~ s/[^0-9.]//g;
 my @verparts = split(/\./, $flexver);
@@ -48,7 +48,7 @@ close($mf);
 my $basetarg = basename($output);
 my $flexflags = ($make =~ /^$basetarg:\s*FLEXFLAGS\s*=\s*(\S.*)/m ? $1 : '');
 
-system("flex $flexflags -o$output $input");
+system("win_flex $flexflags -o$output $input");
 if ($? == 0)
 {
 
diff --git a/src/tools/msvc/pgbison.pl b/src/tools/msvc/pgbison.pl
index 895e398c0..f5b524a5d 100644
--- a/src/tools/msvc/pgbison.pl	
+++ b/src/tools/msvc/pgbison.pl
@@ -9,7 +9,7 @@ use File::Basename;
 
 do './src/tools/msvc/buildenv.pl' if -e 'src/tools/msvc/buildenv.pl';
 
-my ($bisonver) = `bison -V`;    # grab first line
+my ($bisonver) = `win_bison -V`;    # grab first line
 $bisonver = (split(/\s+/, $bisonver))[3];    # grab version number
 
 unless ($bisonver eq '1.875' || $bisonver ge '2.2')
@@ -45,5 +45,5 @@ close($mf);
 
 my $nodep = $bisonver ge '3.0' ? "-Wno-deprecated" : "";
 
-system("bison $nodep $headerflag $input -o $output");
+system("win_bison $nodep $headerflag $input -o $output");
 exit $? >> 8;